Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF00562 across 1 genomes (restricted to CJARD) · 71 ms.

Species with hits:← all speciesCJARD 7
SpeciesGene IDPfam termMatchSourceBrowser
CJARDENSAVKP00000001376.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
CJARDENSAVKP00000016560.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
CJARDENSAVKP00000016585.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
CJARDENSAVKP00000001403.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
CJARDENSAVKP00000042853.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
CJARDENSAVKP00000016575.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse
CJARDENSAVKP00000016602.1PF00562RNA polymerase Rpb2, domain 6InterproscanJBrowse

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