Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF00563 across 1 genomes (restricted to AAURI2) · 57 ms.

Species with hits:← all speciesAAURI2 11
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold862.g2.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold862.g1.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold680.g3.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold738.g9.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold3174.g1.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold1791.g4.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold10.g31.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold680.g1.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold228.g11.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold10.g151.t1PF00563EAL domainInterproscanJBrowse
AAURI2scaffold1672.g5.t1PF00563EAL domainInterproscanJBrowse

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