Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF00587 across 1 genomes (restricted to Aurelia aurita) · 0 ms.

Species with hits:← all speciesAurelia aurita 8
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia auritascaffold23.g99.t3PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold23.g99.t4PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold23.g99.t2PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold87.g30.t1PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold87.g30.t2PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold23.g99.t1PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold224.g34.t1PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
Aurelia auritascaffold131.g40.t1PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse

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