Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF00587 across 1 genomes (restricted to CSP1) · 54 ms.

Species with hits:← all speciesCSP1 6
SpeciesGene IDPfam termMatchSourceBrowser
CSP1Csp0G408110PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
CSP1Csp0G344620PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
CSP1Csp0G407760PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
CSP1Csp0G334260PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
CSP1Csp0G208900PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
CSP1Csp0G350730PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse

TOP