Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF00587 across 1 genomes (restricted to HIMPE) · 25 ms.

Species with hits:← all speciesHIMPE 11
SpeciesGene IDPfam termMatchSourceBrowser
HIMPEevm.model.Chr12.960PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig132.240PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig132.196PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Chr06.1143PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Chr01.5826PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig139.5PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig136.100PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig132.112PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Chr02.1855PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig136.126PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse
HIMPEevm.model.Contig128.44PF00587tRNA synthetase class II core domain (G, H, P, S and T)InterproscanJBrowse

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