Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF00636 across 1 genomes (restricted to AAURI1) · 77 ms.

Species with hits:← all speciesAAURI1 9
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold294.g12.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold15.g136.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold15.g136.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold15.g135.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold15.g135.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold62.g105.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold62.g105.t1PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold62.g105.t2PF00636Ribonuclease III domainInterproscanJBrowse
AAURI1scaffold62.g105.t2PF00636Ribonuclease III domainInterproscanJBrowse

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