Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF00873 across 1 genomes (restricted to Aurelia aurita complex sp. Pacific) · 2 ms.

Species with hits:← all speciesAurelia aurita complex sp. Pacific 7
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold738.g20.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold228.g4.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold680.g7.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold1461.g4.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold1747.g10.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold10.g160.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold228.g2.t1PF00873AcrB/AcrD/AcrF familyInterproscanJBrowse

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