Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF00907 across 1 genomes (restricted to AAURI1) · 81 ms.

Species with hits:← all speciesAAURI1 16
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold87.g45.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold23.g100.t2PF00907T-boxInterproscanJBrowse
AAURI1scaffold148.g21.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold1.g316.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold148.g27.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold23.g100.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold148.g27.t2PF00907T-boxInterproscanJBrowse
AAURI1scaffold116.g39.t2PF00907T-boxInterproscanJBrowse
AAURI1scaffold182.g42.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold182.g42.t2PF00907T-boxInterproscanJBrowse
AAURI1scaffold116.g39.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold63.g20.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold57.g38.t2PF00907T-boxInterproscanJBrowse
AAURI1scaffold57.g38.t1PF00907T-boxInterproscanJBrowse
AAURI1scaffold182.g42.t3PF00907T-boxInterproscanJBrowse
AAURI1scaffold182.g42.t3PF00907T-boxInterproscanJBrowse

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