Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 3 gene–annotation pairs matching PF01000 across 1 genomes (restricted to ROSCU) · 64 ms.

Species with hits:← all speciesROSCU 3
SpeciesGene IDPfam termMatchSourceBrowser
ROSCUENSJQFP00000024751.1PF01000RNA polymerase Rpb3/RpoA insert domainInterproscanJBrowse
ROSCUENSJQFP00000031767.1PF01000RNA polymerase Rpb3/RpoA insert domainInterproscanJBrowse
ROSCUENSJQFP00000031756.1PF01000RNA polymerase Rpb3/RpoA insert domainInterproscanJBrowse

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