Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF01044 across 1 genomes (restricted to AAURI1) · 46 ms.

Species with hits:← all speciesAAURI1 19
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold267.g10.t6PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold345.g18.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold44.g83.t2PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold44.g83.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold44.g83.t3PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold267.g10.t4PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold267.g10.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold267.g10.t3PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold265.g16.t2PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold570.g1.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold345.g6.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold570.g1.t3PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold267.g10.t2PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold570.g1.t2PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold267.g10.t5PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold265.g16.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold144.g31.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold144.g31.t1PF01044Vinculin familyInterproscanJBrowse
AAURI1scaffold345.g13.t1PF01044Vinculin familyInterproscanJBrowse

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