Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF01085 across 1 genomes (restricted to Nematostella vectensis) · 2 ms.

Species with hits:← all speciesNematostella vectensis 8
SpeciesGene IDPfam termMatchSourceBrowser
Nematostella vectensisXP_032242002.2PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_001636412.3PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_032242000.2PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_032241999.2PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_032242001.2PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_048580044.1PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_032218777.2PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse
Nematostella vectensisXP_048584286.1PF01085Hedgehog amino-terminal signalling domainInterproscanJBrowse

TOP