Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF01139 across 1 genomes (restricted to Rhodactis osculifera) · 1 ms.

Species with hits:← all speciesRhodactis osculifera 6
SpeciesGene IDPfam termMatchSourceBrowser
Rhodactis osculiferaENSJQFP00000032979.1PF01139tRNA-splicing ligase RtcBInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000012461.1PF01139tRNA-splicing ligase RtcBInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000012454.1PF01139tRNA-splicing ligase RtcBInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000012438.1PF01139tRNA-splicing ligase RtcBInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000032975.1PF01139tRNA-splicing ligase RtcBInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000012446.1PF01139tRNA-splicing ligase RtcBInterproscanJBrowse

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