Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF01142 across 1 genomes (restricted to Acropora muricata) · 2 ms.

Species with hits:← all speciesAcropora muricata 8
SpeciesGene IDPfam termMatchSourceBrowser
Acropora muricataamur_s1701.g2.t2PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s0011.g45.t2PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s0011.g45.t1PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s1701.g2.t3PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s0011.g47.t1PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s1701.g2.t1PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s0042.g6.t2PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Acropora muricataamur_s0042.g6.t1PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse

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