Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 3 gene–annotation pairs matching PF01142 across 1 genomes (restricted to Pocillopora acuta) · 8 ms.

Species with hits:← all speciesPocillopora acuta 3
SpeciesGene IDPfam termMatchSourceBrowser
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g16415.t1PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g30928.t2PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g30928.t2PF01142tRNA pseudouridine synthase D (TruD)InterproscanJBrowse

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