Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF01189 across 1 genomes (restricted to Acropora muricata) · 2 ms.

Species with hits:← all speciesAcropora muricata 7
SpeciesGene IDPfam termMatchSourceBrowser
Acropora muricataamur_s0022.g38.t1PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse
Acropora muricataamur_s0126.g44.t1PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse
Acropora muricataamur_s0014.g37.t1PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse
Acropora muricataamur_s0585.g1.t1PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse
Acropora muricataamur_s0302.g23.t1PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse
Acropora muricataamur_s0022.g38.t2PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse
Acropora muricataamur_s0064.g2.t1PF0118916S rRNA methyltransferase RsmB/FInterproscanJBrowse

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