Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF01248 across 1 genomes (restricted to BCFM) · 72 ms.

Species with hits:← all speciesBCFM 8
SpeciesGene IDPfam termMatchSourceBrowser
BCFMM_g24341.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g15070.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g38944.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g30257.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g30257.t2PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g4833.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g37765.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
BCFMM_g42699.t1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse

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