Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF01248 across 1 genomes (restricted to Cassiopea sp. PORT0000214) · 1 ms.

Species with hits:← all speciesCassiopea sp. PORT0000214 9
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea sp. PORT0000214P_ENSNWCP00000016100.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000009556.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000019836.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000019218.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000005883.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000006588.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000002036.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000005876.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse
Cassiopea sp. PORT0000214P_ENSNWCP00000025316.1PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyInterproscanJBrowse

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