Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF01388 across 1 genomes (restricted to Actinoscyphia liui) · 2 ms.

Species with hits:← all speciesActinoscyphia liui 12
SpeciesGene IDPfam termMatchSourceBrowser
Actinoscyphia liuigene12514.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene24659.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene27577.t2PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene02306.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene29790.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene02722.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene24659.t2PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene20335.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene29790.t4PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene18554.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene27577.t1PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse
Actinoscyphia liuigene29790.t3PF01388ARID/BRIGHT DNA binding domainInterproscanJBrowse

TOP