Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF01409 across 1 genomes (restricted to AAURI2) · 54 ms.

Species with hits:← all speciesAAURI2 4
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold3137.g2.t2PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
AAURI2scaffold3137.g2.t2PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
AAURI2scaffold3137.g2.t1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
AAURI2scaffold3137.g2.t1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse

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