Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF01409 across 1 genomes (restricted to AMURI) · 78 ms.

Species with hits:← all species AMURI 7

Species	Gene ID	Pfam term	Match	Source	Browser
AMURI	amur_s5372.g1.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse
AMURI	amur_s0146.g8.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse
AMURI	amur_s0356.g5.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse
AMURI	amur_s0077.g21.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse
AMURI	amur_s0077.g21.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse
AMURI	amur_s2644.g1.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse
AMURI	amur_s0339.g3.t1	PF01409	tRNA synthetases class II core domain (F)	Interproscan	JBrowse