Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF01409 across 1 genomes (restricted to HIMPE) · 31 ms.

Species with hits:← all speciesHIMPE 8
SpeciesGene IDPfam termMatchSourceBrowser
HIMPEevm.model.Contig125.62PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Contig123.272PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Contig132.496PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Contig123.273PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Contig136.70PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Chr12.549PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Chr12.549PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HIMPEevm.model.Chr02.960PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse

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