Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF01409 across 1 genomes (restricted to HOCTO) · 40 ms.

Species with hits:← all speciesHOCTO 6
SpeciesGene IDPfam termMatchSourceBrowser
HOCTOBRAKERHOCP00005003582.1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HOCTOg11171.t1.1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HOCTOBRAKERHOCP00005002851.1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HOCTOBRAKERHOCP00005002851.1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HOCTOg5389.t1.1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse
HOCTOg5389.t1.1PF01409tRNA synthetases class II core domain (F)InterproscanJBrowse

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