Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF01535 across 1 genomes (restricted to Alvinactis idsseensis sp. Nov.) · 2 ms.

Species with hits:← all species Alvinactis idsseensis sp. Nov. 6

Species	Gene ID	Pfam term	Match	Source	Browser
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g24451	PF01535	PPR repeat	Interproscan	JBrowse
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g24451	PF01535	PPR repeat	Interproscan	JBrowse
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g27652	PF01535	PPR repeat	Interproscan	JBrowse
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g20307	PF01535	PPR repeat	Interproscan	JBrowse
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g20307	PF01535	PPR repeat	Interproscan	JBrowse
Alvinactis idsseensis sp. Nov.	alvinactis_v1_g12549	PF01535	PPR repeat	Interproscan	JBrowse