Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF02028 across 1 genomes (restricted to CSALA) · 86 ms.

Species with hits:← all speciesCSALA 8
SpeciesGene IDPfam termMatchSourceBrowser
CSALAENSOFVP00000033871.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000009651.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000022718.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000022275.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000033873.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000020298.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000009666.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse
CSALAENSOFVP00000033880.1PF02028BCCT, betaine/carnitine/choline family transporterInterproscanJBrowse

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