Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF02141 across 1 genomes (restricted to AAURI1) · 54 ms.

Species with hits:← all speciesAAURI1 12
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold198.g32.t2PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold185.g1.t3PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold198.g32.t1PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold185.g1.t2PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold671.g1.t1PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold362.g9.t2PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold362.g9.t1PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold270.g16.t1PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold270.g16.t2PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold362.g9.t3PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold120.g66.t1PF02141DENN (AEX-3) domainInterproscanJBrowse
AAURI1scaffold362.g9.t4PF02141DENN (AEX-3) domainInterproscanJBrowse

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