Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF02415 across 1 genomes (restricted to PCOMP) · 49 ms.

Species with hits:← all speciesPCOMP 10
SpeciesGene IDPfam termMatchSourceBrowser
PCOMPPorites_compressa_HIv1___TS.g39901.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g19563.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g32737.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g21808.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___TS.g2996.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___TS.g2996.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___TS.g2996.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g33547.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g33547.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g33547.t1PF02415Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeatInterproscanJBrowse

TOP