Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF02463 across 1 genomes (restricted to AMYRI) · 61 ms.

Species with hits:← all speciesAMYRI 16
SpeciesGene IDPfam termMatchSourceBrowser
AMYRIg28082.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000034214.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000005468.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIg20275.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000010640.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIg6729.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIg22881.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000024350.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000010543.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIg6728.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIg20277.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000005770.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRI9396_t.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000019842.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIBRAKERYMEP00000019891.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse
AMYRIg25862.t1.1PF02463RecF/RecN/SMC N terminal domainInterproscanJBrowse

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