Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF02889 across 1 genomes (restricted to AAURI2) · 56 ms.

Species with hits:← all speciesAAURI2 12
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1690.g2.t2PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold305.g10.t2PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold385.g2.t2PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold239.g4.t1PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold239.g4.t1PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold385.g2.t1PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold439.g11.t3PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold439.g11.t2PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold1690.g2.t1PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold1690.g1.t1PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold305.g10.t3PF02889Sec63 Brl domainInterproscanJBrowse
AAURI2scaffold305.g10.t1PF02889Sec63 Brl domainInterproscanJBrowse

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