Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF03104 across 1 genomes (restricted to AAURI2) · 58 ms.

Species with hits:← all speciesAAURI2 5
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold81.g19.t1PF03104DNA polymerase family B, exonuclease domainInterproscanJBrowse
AAURI2scaffold10.g20.t1PF03104DNA polymerase family B, exonuclease domainInterproscanJBrowse
AAURI2scaffold52.g24.t1PF03104DNA polymerase family B, exonuclease domainInterproscanJBrowse
AAURI2scaffold52.g24.t4PF03104DNA polymerase family B, exonuclease domainInterproscanJBrowse
AAURI2scaffold127.g18.t1PF03104DNA polymerase family B, exonuclease domainInterproscanJBrowse

TOP