Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF03178 across 1 genomes (restricted to HOCTO) · 38 ms.

Species with hits:← all species HOCTO 8

Species	Gene ID	Pfam term	Match	Source	Browser
HOCTO	BRAKERHOCP00005014423.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	g17238.t1.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	g17366.t1.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	BRAKERHOCP00005015663.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	BRAKERHOCP00005017264.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	g294.t1.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	5007_t.1	PF03178	CPSF A subunit region	Interproscan	JBrowse
HOCTO	BRAKERHOCP00005014520.1	PF03178	CPSF A subunit region	Interproscan	JBrowse