Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF03226 across 1 genomes (restricted to AGEMM) · 39 ms.

Species with hits:← all speciesAGEMM 6
SpeciesGene IDPfam termMatchSourceBrowser
AGEMMagem_s0005.g88.t1PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyInterproscanJBrowse
AGEMMagem_s0005.g89.t1PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyInterproscanJBrowse
AGEMMagem_s0002.g353.t1PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyInterproscanJBrowse
AGEMMagem_s0120.g11.t1PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyInterproscanJBrowse
AGEMMagem_s0005.g88.t2PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyInterproscanJBrowse
AGEMMagem_s0223.g25.t1PF03226Yippee zinc-binding/DNA-binding /Mis18, centromere assemblyInterproscanJBrowse

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