Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF03259 across 1 genomes (restricted to AMURI) · 72 ms.

Species with hits:← all species AMURI 7

Species	Gene ID	Pfam term	Match	Source	Browser
AMURI	amur_s4532.g1.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse
AMURI	amur_s0298.g9.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse
AMURI	amur_s0129.g30.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse
AMURI	amur_s0175.g9.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse
AMURI	amur_s0009.g74.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse
AMURI	amur_s0265.g20.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse
AMURI	amur_s0122.g34.t1	PF03259	Roadblock/LC7 domain	Interproscan	JBrowse