Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF03876 across 1 genomes (restricted to HOCTO) · 48 ms.

Species with hits:← all speciesHOCTO 4
SpeciesGene IDPfam termMatchSourceBrowser
HOCTOBRAKERHOCP00005005780.1PF03876SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397InterproscanJBrowse
HOCTOg11422.t1.1PF03876SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397InterproscanJBrowse
HOCTOg3813.t1.1PF03876SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397InterproscanJBrowse
HOCTOBRAKERHOCP00005008267.1PF03876SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397InterproscanJBrowse

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