Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF04055 across 1 genomes (restricted to AMYRI) · 82 ms.

Species with hits:← all speciesAMYRI 16
SpeciesGene IDPfam termMatchSourceBrowser
AMYRIBRAKERYMEP00000010570.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg6558.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000028217.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg17443.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000010880.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg27721.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000038227.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg23773.t2.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000010475.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg6550.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000008314.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg5358.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000038226.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg23773.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIBRAKERYMEP00000019920.1PF04055Radical SAM superfamilyInterproscanJBrowse
AMYRIg14525.t1.1PF04055Radical SAM superfamilyInterproscanJBrowse

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