Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF04055 across 1 genomes (restricted to ASP1) · 63 ms.

Species with hits:← all speciesASP1 9
SpeciesGene IDPfam termMatchSourceBrowser
ASP1Acti_044163-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_012985-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_003512-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_034729-T2PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_033747-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_006287-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_006211-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_027293-T1PF04055Radical SAM superfamilyInterproscanJBrowse
ASP1Acti_006326-T1PF04055Radical SAM superfamilyInterproscanJBrowse

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