Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PF04055 across 1 genomes (restricted to CSALA) · 90 ms.

Species with hits:← all species CSALA 13

Species	Gene ID	Pfam term	Match	Source	Browser
CSALA	ENSOFVP00000013489.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000013482.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000012622.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000010731.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000031375.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000013500.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000031516.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000036006.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000010719.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000012610.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000035984.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000036514.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse
CSALA	ENSOFVP00000035996.1	PF04055	Radical SAM superfamily	Interproscan	JBrowse