Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04146 across 1 genomes (restricted to ASELA) · 73 ms.

Species with hits:← all species ASELA 5

Species	Gene ID	Pfam term	Match	Source	Browser
ASELA	asel_s0187.g31.t1	PF04146	YT521-B-like domain	Interproscan	JBrowse
ASELA	asel_s0274.g6.t1	PF04146	YT521-B-like domain	Interproscan	JBrowse
ASELA	asel_s0448.g7.t1	PF04146	YT521-B-like domain	Interproscan	JBrowse
ASELA	asel_s0448.g7.t2	PF04146	YT521-B-like domain	Interproscan	JBrowse
ASELA	asel_s0098.g36.t1	PF04146	YT521-B-like domain	Interproscan	JBrowse