Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF04408 across 1 genomes (restricted to Acropora muricata) · 2 ms.

Species with hits:← all speciesAcropora muricata 16
SpeciesGene IDPfam termMatchSourceBrowser
Acropora muricataamur_s0030.g40.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0421.g21.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0370.g3.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s1853.g1.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0142.g31.t2PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0182.g38.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0287.g11.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0287.g10.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0400.g3.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0081.g59.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0048.g21.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0007.g40.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0110.g30.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0142.g31.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s0108.g62.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse
Acropora muricataamur_s3881.g1.t1PF04408Helicase associated domain (HA2), winged-helixInterproscanJBrowse

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