Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04410 across 1 genomes (restricted to ECAVO) · 105 ms.

Species with hits:← all speciesECAVO 5
SpeciesGene IDPfam termMatchSourceBrowser
ECAVOENSLDHP00000036513.1PF04410Gar1/Naf1 RNA binding regionInterproscanJBrowse
ECAVOENSLDHP00000019339.1PF04410Gar1/Naf1 RNA binding regionInterproscanJBrowse
ECAVOENSLDHP00000036528.1PF04410Gar1/Naf1 RNA binding regionInterproscanJBrowse
ECAVOENSLDHP00000036519.1PF04410Gar1/Naf1 RNA binding regionInterproscanJBrowse
ECAVOENSLDHP00000019330.1PF04410Gar1/Naf1 RNA binding regionInterproscanJBrowse

TOP