Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 22 gene–annotation pairs matching PF04434 across 1 genomes (restricted to AAURI2) · 32 ms.

Species with hits:← all speciesAAURI2 22
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1579.g2.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2680.g1.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold628.g17.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2102.g2.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold4160.g1.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold1083.g6.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold1719.g4.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2931.g2.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold3424.g1.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2631.g2.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2073.g1.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold1982.g4.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold305.g2.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold208.g10.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold893.g5.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2775.g3.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold2012.g1.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold1135.g9.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold3508.g2.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold1582.g4.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold930.g4.t1PF04434SWIM zinc fingerInterproscanJBrowse
AAURI2scaffold547.g14.t1PF04434SWIM zinc fingerInterproscanJBrowse

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