Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF04434 across 1 genomes (restricted to AMURI) · 81 ms.

Species with hits:← all species AMURI 8

Species	Gene ID	Pfam term	Match	Source	Browser
AMURI	amur_s0136.g28.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s1227.g1.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s0054.g1.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s0501.g12.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s0201.g12.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s0107.g10.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s0739.g2.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse
AMURI	amur_s1945.g1.t1	PF04434	SWIM zinc finger	Interproscan	JBrowse