Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04494 across 1 genomes (restricted to ASPAT) · 118 ms.

Species with hits:← all speciesASPAT 5
SpeciesGene IDPfam termMatchSourceBrowser
ASPATENSEWQP00005012647.1PF04494WD40 associated region in TFIID subunit, NTD2 domainInterproscanJBrowse
ASPATENSEWQP00005012634.1PF04494WD40 associated region in TFIID subunit, NTD2 domainInterproscanJBrowse
ASPATENSEWQP00005038157.1PF04494WD40 associated region in TFIID subunit, NTD2 domainInterproscanJBrowse
ASPATENSEWQP00005038172.1PF04494WD40 associated region in TFIID subunit, NTD2 domainInterproscanJBrowse
ASPATENSEWQP00005038183.1PF04494WD40 associated region in TFIID subunit, NTD2 domainInterproscanJBrowse

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