Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF04561 across 1 genomes (restricted to Acropora spathulata) · 1 ms.

Species with hits:← all speciesAcropora spathulata 9
SpeciesGene IDPfam termMatchSourceBrowser
Acropora spathulataENSEWQP00005039702.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005020028.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005020009.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005019982.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005039727.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005011942.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005011973.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005039745.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
Acropora spathulataENSEWQP00005011957.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse

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