Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04561 across 1 genomes (restricted to CSALA) · 70 ms.

Species with hits:← all speciesCSALA 5
SpeciesGene IDPfam termMatchSourceBrowser
CSALAENSOFVP00000017561.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
CSALAENSOFVP00000017573.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
CSALAENSOFVP00000023841.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
CSALAENSOFVP00000001236.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse
CSALAENSOFVP00000023856.1PF04561RNA polymerase Rpb2, domain 2InterproscanJBrowse

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