Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 4 gene–annotation pairs matching PF04563 across 1 genomes (restricted to AACUM) · 76 ms.

Species with hits:← all species AACUM 4

Species	Gene ID	Pfam term	Match	Source	Browser
AACUM	aacu_s0044.g52.t1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
AACUM	aacu_s0005.g244.t1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
AACUM	aacu_s0045.g194.t1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
AACUM	aacu_s0045.g194.t2	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse