Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF04563 across 1 genomes (restricted to Acropora gemmifera) · 6 ms.

Species with hits:← all species Acropora gemmifera 6

Species	Gene ID	Pfam term	Match	Source	Browser
Acropora gemmifera	agem_s0205.g9.t1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Acropora gemmifera	agem_s0001.g235.t1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Acropora gemmifera	agem_s0027.g89.t1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Acropora gemmifera	agem_s0205.g9.t3	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Acropora gemmifera	agem_s0205.g9.t2	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Acropora gemmifera	agem_s0205.g9.t4	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse