Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF04563 across 1 genomes (restricted to Muricea muricata) · 1 ms.

Species with hits:← all species Muricea muricata 6

Species	Gene ID	Pfam term	Match	Source	Browser
Muricea muricata	BRAKERXEIP00000016858.1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000016860.1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000047389.1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000033397.1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000038028.1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse
Muricea muricata	BRAKERXEIP00000049856.1	PF04563	RNA polymerase beta subunit	Interproscan	JBrowse