Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF04564 across 1 genomes (restricted to Actinoscyphia liui) · 2 ms.

Species with hits:← all species Actinoscyphia liui 8

Species	Gene ID	Pfam term	Match	Source	Browser
Actinoscyphia liui	gene21952.t1	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene27538.t1	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene12219.t2	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene21952.t2	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene10807.t1	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene11270.t1	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene12219.t1	PF04564	U-box domain	Interproscan	JBrowse
Actinoscyphia liui	gene18739.t1	PF04564	U-box domain	Interproscan	JBrowse