Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF04840 across 1 genomes (restricted to Actinoscyphia liui) · 1 ms.

Species with hits:← all speciesActinoscyphia liui 5
SpeciesGene IDPfam termMatchSourceBrowser
Actinoscyphia liuigene20501.t2PF04840Vps16, C-terminal regionInterproscanJBrowse
Actinoscyphia liuigene11116.t1PF04840Vps16, C-terminal regionInterproscanJBrowse
Actinoscyphia liuigene20501.t1PF04840Vps16, C-terminal regionInterproscanJBrowse
Actinoscyphia liuigene20501.t3PF04840Vps16, C-terminal regionInterproscanJBrowse
Actinoscyphia liuigene11116.t2PF04840Vps16, C-terminal regionInterproscanJBrowse

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