Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF04983 across 1 genomes (restricted to HOCTO) · 85 ms.

Species with hits:← all speciesHOCTO 6
SpeciesGene IDPfam termMatchSourceBrowser
HOCTOBRAKERHOCP00005017845.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
HOCTOg608.t1.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
HOCTOBRAKERHOCP00005003746.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
HOCTOg12566.t1.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
HOCTOBRAKERHOCP00005021181.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse
HOCTOg7888.t1.1PF04983RNA polymerase Rpb1, domain 3InterproscanJBrowse

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